Section outline

  • General

    Collapse all Expand all

  • Tuesday, September 15, 2015, 10:30 AM - 12:00 PM

    Lecture: Introduction
    Review of regression; major model questions, properties of a good regression model.

    Faculty:  David Glidden

    Location:      Genentech South Room 261

    • Prospectus:

    • desc 210 2015 File

    • Session Slides:

    • lecture 1 handout File

    • Assignment:

    • hw1 File
    • clarrif HW1 File

    • Assignment Due Date:  September 29, 2015 by 10:30am. Drop off at Barbara Grimes mailbox at Mission Hall 2nd Floor, Suite 2653 (next to the Xerox copier)

       

    • Assignment Answer Key (Access restricted to registered students):

    • Datasets:

    • actg5235 File
    • hw1-sim File

  • Tuesday, September 22, 2015; 10:30 AM - 12:00 PM

    Lecture: Functional Form
    Splines, smoothing, categorizing continuous predictors

    Faculty:  David Glidden

    Location:  Genentech South 261

    • Session Slides:

    • lecture2 handout File

    • Required Reading:

    • Greenland1995 File
      Not available unless: Your ID number contains 02

    • Datasets:

    • lecture2 plots File
    • lecture2 File

  • Tuesday, September 29, 2015; 10:30 AM - 12:00 PM

    Lecture: Repeated Measures Data
    Mixed models, generalized estimating eqns

    Faculty:  David Glidden

    Location:  Mission Hall 1407

    • Session Slides:

    • lecture3 handout File

    • Required Reading:

      Vittinghoff, Chapter 7

    • Resources:

    • Assignment:

    • Assignment Due Date:  October 13, 2015 by 10:30am. Drop off at Barbara Grimes mailbox at Mission Hall 2nd Floor, Suite 2653 (next to the Xerox copier)

    • hw2 File
    • hw2 File

    • Assignment Answer Key (Access restricted to registered students):

    • Stata Files:

    • lecture3 File
    • lecture 3 File

  • Tuesday, September 29, 2015; 3:15 PM - 4:15 PM

    Computer Lab

    Faculty:  David Glidden, Barbara Grimes

    Location:      Glidden/Grimes Mission Hall 1406

    • Assignment: Optional narrative description

    • lab1 File

    • Datasets:

    • lab1 File
    • lab1 File

  • Tuesday, October 6, 2015; 10:30 AM - 12:00 PM

    Lecture: Missing Values
    Types of missing data, MCAR/MAR/NAR, maximum likelihood

    Faculty:  David Glidden

    Location:  Mission Hall 1407

    • Session Slides:

    • lecture4 handout File

    • Required Reading:

      Vittinghoff, CH 11.1-11.4, 11.6

  • Tuesday, October 13, 2015; 10:30 AM - 12:00 PM

    Lecture: Multiple Imputation
    Choice of imputation model, mi package

    Faculty: David Glidden

    Location: Mission Hall 1407

    • Session Slides:

    • lecture5 handout File

    • Required Reading:

      Vittinghoff, Chapter 11.5, 11.7-11.8

    • Assignment: Optional narrative description

    • hw3 File
    • hwk3 wide File
    • hwk long File

    • Assignment Due Date:  October 27, 2015 by 10:30am.  Drop off at Barbara Grimes mailbox at Mission Hall 2nd Floor, Suite 2653 (next to the Xerox copier)

    • Assignment Answer Key (Access restricted to registered students):

  • Tuesday, October 13, 2015; 3:15 PM - 4:15 PM

    Computer Lab

    Faculty:  David Glidden, Barbara Grimes

    Location:      Glidden/Grimes Mission Hall 1406

    • Assignment:

    • lab2 File

    • Datasets:

    • lab2 File
    • lab2 File

  • Tuesday, October 20, 2015; 10:30 AM - 12:00 PM

    Lecture: Missing Data
    Multiple imputation, maximum likelihood, inverse weighting

    Faculty: David Glidden

    Location: Mission Hall 1407

    • Session Slides:

    • lecture 6 handout File

    • Session Audio/Video Recording (Access restricted to registered students):

    • Required Reading:

      Vittinghoff, Chapter 11.9

    • Assignment: Optional narrative description

    • hw4 File

    • Assignment Answer Key (Access restricted to registered students):

    • Datasets:

    • hwk4 wide File
    • hwk4 long File

  • Tuesday, October 27, 2015; 10:30 AM - 12:00 PM

    Lecture: Causal Inference
    Strengthening causal inference using regression

    Faculty:  David Glidden

    Location    :  Mission Hall 1407

    • Session Slides:

    • lecture 7 handout File

    • Session Audio/Video Recording (Access restricted to registered students):

    • Required Reading:

      Vittinghoff, Chapter 9.1-9.2

    • Assignment Due Date: November 3, 2015 by 10:30am. Drop off at Barbara Grimes mailbox at Mission Hall 2nd Floor, Suite 2653 (next to the Xerox copier)

  • Tuesday, October 27, 2015; 3:15 PM - 4:15 PM

    Computer Lab

    Faculty:  David Glidden, Barbara Grimes

    Location:      Mission Hall 1406

    • Assignment:

    • lab3 File

    • Datasets:

    • lab3 File
    • lab3 File

  • Tuesday, November 10, 2015; 10:30 AM - 12:00 PM

    Lecture: Propensity Scores
    Propensity scores for causal inference and contrast with regression models.

    Faculty: David Glidden

    Location: Mission Hall 1407

    • Session Slides:

    • lecture8 handout File

    • Session Audio/Video Recording (Access restricted to registered students):

    • Required Reading:

      Vittinghoff, Chapter 9.4

    • Resources:

    • lecture class File
    • lecture 8 class File

    • Assignment: Optional narrative description

  • Tuesday, November 17, 2015; 10:30 AM - 12:00 PM

    Lecture: Predictive Models
    Building Models for Prediction

    Faculty: David Glidden

    Location: Mission Hall 1407

    • Session Slides:

    • Lecture 9 File

    • Session Audio/Video Recording (Access restricted to registered students):

    • Required Reading:

      Vittinghoff, Chapter 10.1

    • Datasets:

  • Tuesday, November 24, 2015 - No Lecture - Thanksgiving Holiday

  • Tuesday, December 1, 2015; 10:30 AM - 12:00 PM

    Lecture: Model validation

    Assessing for prediction.

    Faculty: David Glidden

    Location: Mission Hall 1407

    • Session Slides:

    • lecture 10 handout File

    • Session Audio/Video Recording (Access restricted to registered students):

    • Required Reading:

    • Steyerberg File
      Not available unless: Your ID number contains 02

    • Assignment: Optional narrative description

    • hwk5 File
    • hw5 File

    • Assignment Due Date:  December 8

  • Tuesday, December 1 2015; 3:15 PM - 4:15 PM

    Computer Lab

    Faculty:  David Glidden, Barbara Grimes

    Location:  Mission Hall 1406

    • Assignment: Optional narrative description

    • lab4 File

    • Assignment Answer Key (Access restricted to registered students):

    • Datasets:

    • lab-learn File
    • lab-cv File

  • Tuesday, December 8, 2015; 10:30 AM - 12:00 PM

    Lecture: Model Comparison
    Quantifying Improvement in Prediction

    Faculty: David Glidden

    Location: Mission Hall 1407

    • Session Slides:

    • lecture 11 handout File

    • Session Audio/Video Recording (Access restricted to registered students):

    • Required Reading:

    • Datasets: