BIOSTAT 210: Biostatistical Methods for Clinical Research IV (Fall 2014)

Section outline

• Select section General

  Collapse Expand

  General

  Collapse all Expand all

  • Select activity Home Overall Schedule...

    		Home Overall Schedule Courses Programs Rosters
    BIOSTATISTICAL METHODS FOR CLINICAL RESEARCH IV BIOSTATS 210 Fall 2014 (2 units). Course Director: David Glidden, PhD. Professor, Department of Epidemiology and Biostatistics

  • Select activity News forum

    

    News forum
• Select section Tuesday, September 16, 2014, 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, September 16, 2014, 10:30 AM - 12:00 PM

  Lecture: Introduction
  Review of regression; major model questions, properties of a good regression model.

  Faculty:  David Glidden
  
  Location:  China Basin 6704
  

  • Select activity Prospectus:

    Prospectus:

  • Select activity BIOSTAT 210 Course Overview

    

    BIOSTAT 210 Course Overview File
  • Select activity Session Slides:

    Session Slides:

  • Select activity lecture1

    

    lecture1 File
  • Select activity Assignment:

    Assignment:

  • Select activity hw1

    

    hw1 File
  • Select activity actg5235

    

    actg5235 File
  • Select activity Assignment Due Date:  September 30, 2014 by 10:30a...

    Assignment Due Date:  September 30, 2014 by 10:30am. Drop off at Barbara Grimes mailbox in Suite 5700

     

  • Select activity Datasets:

    Datasets:
    

  • Select activity hw1-sim.do

    

    hw1-sim.do File
• Select section Tuesday, September 23, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, September 23, 2014; 10:30 AM - 12:00 PM

  Lecture: Functional Form
  Splines, smoothing, categorizing continuous predictors

  Faculty:  David Glidden
  
  Location:  China Basin 6704
  

  • Select activity Session Slides:

    Session Slides:
    

  • Select activity Lecture 2 handout

    

    Lecture 2 handout File
  • Select activity Required Reading:

    Required Reading:

  • Select activity Greenland1995

    

    Greenland1995 File

    Not available unless: Your ID number contains 02
  • Select activity Lecture 2 plots.do

    

    Lecture 2 plots.do File
  • Select activity Lecture 2.dta

    

    Lecture 2.dta File
• Select section Tuesday, September 30, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, September 30, 2014; 10:30 AM - 12:00 PM

  Lecture: Repeated Measures Data
  Mixed models, generalized estimating eqns

  Faculty:  David Glidden
  
  Location:  China Basin 6704

  • Select activity Session Slides:

    Session Slides:
    

  • Select activity lecture3 handout

    

    lecture3 handout File
  • Select activity Required Reading: Vittinghoff, Chapter 7

    Required Reading:

    Vittinghoff, Chapter 7

  • Select activity Resources:

    Resources:

  • Select activity Assignment:

    Assignment:

  • Select activity hw2

    

    hw2 File
  • Select activity hw2

    

    hw2 File
  • Select activity Assignment Answer Key (Access restricted to regist...

    Assignment Answer Key (Access restricted to registered students):

  • Select activity Stata Files:

    Stata Files:

  • Select activity lecture3

    

    lecture3 File
  • Select activity lecture 3

    

    lecture 3 File
• Select section Tuesday, September 30, 2014; 3:15 PM - 4:15 PM

  Collapse Expand

  Tuesday, September 30, 2014; 3:15 PM - 4:15 PM

  Computer Lab
  

  Faculty:  David Glidden, Barbara Grimes
  
  Location:  Glidden/Grimes CB 6704

  • Select activity Assignment: Optional narrative description

    Assignment: Optional narrative description

  • Select activity Datasets:

    Datasets:

  • Select activity lab1

    

    lab1 File
  • Select activity lab1

    

    lab1 File
  • Select activity lab1

    

    lab1 File
  • Select activity lab1 solution

    

    lab1 solution File
• Select section Tuesday, October 7, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, October 7, 2014; 10:30 AM - 12:00 PM

  Lecture: Missing Values
  Types of missing data, MCAR/MAR/NAR, maximum likelihood

  Faculty:  David Glidden
  
  Location:  CB 6704

  • Select activity Session Slides:

    Session Slides:
    

  • Select activity lecture4 handout

    

    lecture4 handout File
  • Select activity Required Reading: Vittinghoff, CH 11.1-11.4, 11.6

    Required Reading:

    Vittinghoff, CH 11.1-11.4, 11.6

• Select section Tuesday, October 14, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, October 14, 2014; 10:30 AM - 12:00 PM

  Lecture: Multiple Imputation
  Choice of imputation model, mi package

  Faculty: David Glidden
  
  Location: China Basin 6704

  • Select activity Session Slides:

    Session Slides:

  • Select activity lecture 5 handout

    

    lecture 5 handout File
  • Select activity Required Reading: Vittinghoff, Chapter 11.5, 11.7...

    Required Reading:

    Vittinghoff, Chapter 11.5, 11.7-11.8

  • Select activity Resources:

    Resources:

  • Select activity Assignment: Optional narrative description

    Assignment: Optional narrative description

  • Select activity hw3

    

    hw3 File
  • Select activity hwk3 long

    

    hwk3 long File
  • Select activity hwk3 wide

    

    hwk3 wide File
• Select section Tuesday, October 14, 2014; 3:15 PM - 4:15 PM

  Collapse Expand

  Tuesday, October 14, 2014; 3:15 PM - 4:15 PM

  Computer Lab
  

  Faculty:  David Glidden, Barbara Grimes
  
  Location:  Glidden/Grimes CB 6704

  • Select activity Assignment:

    Assignment:

  • Select activity Datasets:

    Datasets:

  • Select activity lab2

    

    lab2 File
  • Select activity lab2

    

    lab2 File
  • Select activity lab 2 discussion

    

    lab 2 discussion File
• Select section Tuesday, October 21, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, October 21, 2014; 10:30 AM - 12:00 PM

  Lecture: Missing Data
  Multiple imputation, maximum likelihood, inverse weighting

  Faculty: David Glidden
  
  Location: Mission Hall 1407
  

  • Select activity Session Slides:

    Session Slides:

  • Select activity lecture6 handout

    

    lecture6 handout File
  • Select activity Required Reading: Vittinghoff, Chapter 11.9

    Required Reading:

    Vittinghoff, Chapter 11.9

  • Select activity Assignment: Optional narrative description

    Assignment: Optional narrative description

  • Select activity Datasets:

    Datasets:

• Select section Tuesday, October 28, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, October 28, 2014; 10:30 AM - 12:00 PM

  Lecture: Causal Inference
  Strengthening causal inference using regression

  Faculty:  David Glidden
  
  Location:  Mission Hall 1407

  • Select activity Session Slides:

    Session Slides:

  • Select activity lecture 7 handout

    

    lecture 7 handout File
  • Select activity Required Reading: Vittinghoff, Chapter 9.1-9.2

    Required Reading:

    Vittinghoff, Chapter 9.1-9.2

  • Select activity hw4 2014

    

    hw4 2014 File
  • Select activity hw4

    

    hw4 File
  • Select activity hwk4 long

    

    hwk4 long File
  • Select activity hwk4 wide

    

    hwk4 wide File
• Select section Tuesday, October 28, 2014; 3:15 PM - 4:15 PM

  Collapse Expand

  Tuesday, October 28, 2014; 3:15 PM - 4:15 PM

  Computer Lab
  

  Faculty:  David Glidden, Barbara Grimes
  
  Location:  Mission Hall 1407

  • Select activity lab 3

    

    lab 3 File
  • Select activity lab3

    

    lab3 File
  • Select activity lab3

    

    lab3 File
  • Select activity lab3 discussion

    

    lab3 discussion File
• Select section Tuesday, November 4, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, November 4, 2014; 10:30 AM - 12:00 PM

  Lecture: Propensity Scores
  Propensity scores for causal inference and contrast with regression models.

  Faculty: David Glidden
  
  Location: Mission Hall 1407

  • Select activity Session Slides:

    Session Slides:

  • Select activity lecture 8 handout

    

    lecture 8 handout File
  • Select activity lecture 8 class

    

    lecture 8 class File
  • Select activity lecture class

    

    lecture class File
  • Select activity Required Reading: Vittinghoff, Chapter 9.4

    Required Reading:

    Vittinghoff, Chapter 9.4

  • Select activity Resources:

    Resources:

  • Select activity Assignment: Optional narrative description

    Assignment: Optional narrative description

• Select section Tuesday, November 11, 2014 - No Class (Vetertan's Day Holiday)

  Collapse Expand

  Tuesday, November 11, 2014 - No Class (Vetertan's Day Holiday)
• Select section Tuesday, November 18, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, November 18, 2014; 10:30 AM - 12:00 PM

  Lecture: Predictive Models
  Building Models for Prediction

  Faculty: David Glidden
  
  Location: Mission Hall 1407

  • Select activity Session Slides:

    Session Slides:

  • Select activity lecture 9 handout

    

    lecture 9 handout File
  • Select activity Required Reading: Vittinghoff, Chapter 10.1

    Required Reading:

    Vittinghoff, Chapter 10.1

  • Select activity hwk5

    

    hwk5 File
  • Select activity hw5

    

    hw5 File
  • Select activity Datasets:

    Datasets:

• Select section Tuesday, November 18, 2014; 3:15 PM - 4:15 PM

  Collapse Expand

  Tuesday, November 18, 2014; 3:15 PM - 4:15 PM

  Computer Lab
  

  Faculty:  David Glidden, Barbara Grimes
  
  Location:  Mission Hall 2100
  

  • Select activity Assignment: Optional narrative description

    Assignment: Optional narrative description

  • Select activity Datasets:

    Datasets:

  • Select activity lab-cv

    

    lab-cv File
  • Select activity lab-learn

    

    lab-learn File
  • Select activity lab4

    

    lab4 File
• Select section Tuesday, November 25, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, November 25, 2014; 10:30 AM - 12:00 PM

  Lecture: Model validation
  

  Assessing for prediction.

  Faculty: David Glidden

  Location: Mission Hall 1407

  • Select activity Session Slides:

    Session Slides:

  • Select activity lecture 10 handout

    

    lecture 10 handout File
  • Select activity lecture 10

    

    lecture 10 File
  • Select activity lecture10

    

    lecture10 File
  • Select activity Required Reading:

    Required Reading:

  • Select activity Steyerberg

    

    Steyerberg File

    Not available unless: Your ID number contains 02
• Select section Tuesday, December 2, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, December 2, 2014; 10:30 AM - 12:00 PM

  Lecture: Model Comparison
  Quantifying Improvement in Prediction

  Faculty: David Glidden

  Location: Mission Hall 1407
  

  • Select activity Session Slides:

    Session Slides:

  • Select activity lecture 11

    

    lecture 11 File
  • Select activity Required Reading:

    Required Reading:

  • Select activity Datasets:

    Datasets:

• Select section Tuesday, December 2, 2014; 10:30 AM - 12:00 PM

  Collapse Expand

  Tuesday, December 2, 2014; 10:30 AM - 12:00 PM

  Computer Lab
  

  Faculty:  David Glidden, Barbara Grimes
  
  Location:  Glidden/Grimes Mission Hall 1407

  • Select activity Assignment: Optional narrative description

    Assignment: Optional narrative description

  • Select activity Datasets:

    Datasets:

  • Select activity lab5

    

    lab5 File
  • Select activity lab-learn

    

    lab-learn File